diff --git a/drivers/pci/controller/pci-tegra.c b/drivers/pci/controller/pci-tegra.c
index e97cf6f71e32..77ca6f668cf2 100644
--- a/drivers/pci/controller/pci-tegra.c
+++ b/drivers/pci/controller/pci-tegra.c
@@ -1765,6 +1765,11 @@ static void tegra_pcie_pme_turnoff(struct tegra_pcie_port *port)
 	val = afi_readl(pcie, AFI_PCIE_PME);
 	val &= ~(0x1 << soc->ports[port->index].pme.turnoff_bit);
 	afi_writel(pcie, val, AFI_PCIE_PME);
+
+	/* PCIe link is in L2, bypass CLKREQ# control over PLLE power down */
+	val = afi_readl(pcie, AFI_PLLE_CONTROL);
+	val |= AFI_PLLE_CONTROL_BYPASS_PADS2PLLE_CONTROL;
+	afi_writel(pcie, val, AFI_PLLE_CONTROL);
 }
 
 static void tegra_pcie_msi_irq(struct irq_desc *desc)